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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015935691.1_cds_XP_016481471.1_72791
CDS Infomation

[gene=LOC107802473] [db_xref=GeneID:107802473] [protein=hypersensitive-induced response protein 1] [protein_id=XP_016481471.1] [location=complement(join(89871..90223,90561..90657,90742..90833,90973..91093,91260..91448))] [gbkey=CDS]
Sequence

ATGGGCAATTTGTTCTGCTGTGTTCAAGTTGATCAATCCACAGTTGCAATTAAGGAGCAA
TTTGGCAAGTATCAGGATGTGCTTGAGCCAGGTTGCCACTGTGTGCCTTGGTTCCTTGGA
AGCCAGTTGGCTGGTCATCTCTCCCTCAGAGTGCAGCAACTAGATGTGCGCTGTGAAACC
AAGACAAAGGACAATGTATTTGTCAATGTTGTCGCATCAATTCAGTATCGTGCCCTGGCG
GACAAAGCAAATGATGCTTTCTACAAACTAAGTAACACTAAGGGTCAAATTCAGGCATAT
GTTTTTGACGTCATTAGAGCAAGTGTTCCAAAACTCAATCTGGATGATGTATTTGAGCAA
AAAAATGAAATTGCTAAGGCTGTTGAGGAGGAACTTGAGAAAGCTATGTCAGCTTATGGA
TATGAAATTGTTCAGACACTTATAGTTGATATAGTACCAGATGAGCATGTGAAGAGGGCT
ATGAATGAAATCAACGCTGCTGCTCGGTTGAGGGTGGCTGCTAATGAGAAGGCAGAAGCT
GAGAAGATTTTGCAAATTAAGAGGGCTGAAGGGGAGGCCGAGTCTAAGTATCTCGCAGGC
TTAGGTATTGCTCGACAACGTCAAGCAATTGTGGATGGTCTGAGAGACAGTGTGCTAGGA
TTTTCAGTCAATGTGCCAGGAACTAGTGCAAAGGATGTTATGGACATGGTCCTCGTAACC
CAGTACTTTGACACAATGAAAGAAATTGGCGCTTCCAGCAAATCATCTGCTGTCTTCATC
CCCCACGGGCCTGGTGCTGTAAGAGATGTGGCACAGCAGATCCGTGATGGACTTCTTCAG
GCTTCTGTTTAG

Peptide Sequence

PEP ID

XP_016481471.1
PEP Infomation

PREDICTED: hypersensitive-induced response protein 1 [Nicotiana tabacum]
Sequence

MGNLFCCVQVDQSTVAIKEQFGKYQDVLEPGCHCVPWFLGSQLAGHLSLRVQQLDVRCET
KTKDNVFVNVVASIQYRALADKANDAFYKLSNTKGQIQAYVFDVIRASVPKLNLDDVFEQ
KNEIAKAVEEELEKAMSAYGYEIVQTLIVDIVPDEHVKRAMNEINAAARLRVAANEKAEA
EKILQIKRAEGEAESKYLAGLGIARQRQAIVDGLRDSVLGFSVNVPGTSAKDVMDMVLVT
QYFDTMKEIGASSKSSAVFIPHGPGAVRDVAQQIRDGLLQASV

Transcript Sequence

Gene sequence data has not been registered.